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3NDI

X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Methyltransferasepolymer41646090.91UniProt (B5L6K6)Micromonospora chalcea
2B
(A)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
PubChem (5136)
PubChem (34755)
PubChem (9865603)
PubChem (12312798)
PubChem (58766358)
PubChem (87224684)
PubChem (131697735)
PubChem (145712080)
PubChem (58633578)
PubChem (60038769)
PubChem (73897310)
PubChem (132988922)
PubChem (134692588)
PubChem (135030730)
PubChem (140459785)
PubChem (163046094)
3C
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4D
(A)
THYMIDINE-5'-PHOSPHATEnon-polymer322.21Chemie (TMP)
PubChem (1139)
PubChem (444919)
PubChem (5748250)
PubChem (10147784)
PubChem (18531120)
PubChem (20711568)
PubChem (23657880)
PubChem (24802545)
PubChem (44361457)
PubChem (25113134)
PubChem (9700)
PubChem (51397487)
PubChem (5274091)
PubChem (129069890)
PubChem (133126478)
PubChem (164603144)
5E, F
(A)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
PubChem (1061)
6G
(A)
waterwater18.0369Chemie (HOH)
Sequence modifications
A: 1 - 414 (UniProt: B5L6K6)
PDBExternal DatabaseDetails
Gly -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight46090.9
Non-Polymers*Number of molecules5
Total formula weight976.0
All*Total formula weight47066.9
*Water molecules are not included.

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PDB entries from 2026-04-08

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