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3N97

RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP,-35 element) DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, D)
RNA polymerase sigma factorpolymer728527.92UniProt (Q9EZJ8)
Pfam (PF04545)
Thermus aquaticus
2C, D
(B, C)
DNA-directed RNA polymerase subunit alphapolymer849364.82UniProt (P0A7Z4)
Pfam (PF03118)
Escherichia coliRNAP subunit alpha, Transcriptase subunit alpha, RNA polymerase subunit alpha
3E
(M)
DNA (5'-D(*TP*GP*GP*AP*AP*AP*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*CP*AP*TP*GP*G)-3')polymer226848.51
4F
(N)
DNA (5'-D(*CP*CP*AP*TP*GP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*TP*CP*C)-3')polymer216339.11
5G
(C)
ACETATE IONnon-polymer59.01Chemie (ACT)
6H
(C)
waterwater18.01Chemie (HOH)
Sequence modifications
A, D: 366 - 437 (UniProt: Q9EZJ8)
PDBExternal DatabaseDetails
Met 386Leu 386engineered mutation
-Lys 424SEE REMARK 999
Arg 424Tyr 425SEE REMARK 999
Pro 426Glu 427SEE REMARK 999
Ser 429Thr 430engineered mutation
Glu 430Arg 431engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight48972.9
Non-Polymers*Number of molecules1
Total formula weight59.0
All*Total formula weight49031.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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