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3MZD

Structure of penicillin-binding protein 5 from E. coli: cloxacillin acyl-enzyme complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
D-alanyl-D-alanine carboxypeptidase dacApolymer36339841.11UniProt (P0AEB2)
Pfam (PF00768)
Pfam (PF07943)
Escherichia coliDD-carboxypeptidase, DD-peptidase, Beta-lactamase, Penicillin-binding protein 5, PBP-5
2B
(A)
(2R,4S)-2-[(1S)-1-({[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolid ine-4-carboxylic acidnon-polymer437.91Chemie (CXV)
3C
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
4D
(A)
waterwater18.0222Chemie (HOH)
Sequence modifications
A: 1 - 357 (UniProt: P0AEB2)
PDBExternal DatabaseDetails
Gly 358-SEE REMARK 999
Asp 359-SEE REMARK 999
Pro 360-SEE REMARK 999
Val 361-SEE REMARK 999
Ile 362-SEE REMARK 999
Asp 363-SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39841.1
Non-Polymers*Number of molecules2
Total formula weight530.0
All*Total formula weight40371.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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