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3MVY

X-ray structure of the diatomic oxo-intermediate NikA/1-Int', prior hydroxylation

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Nickel-binding periplasmic proteinpolymer50256360.72UniProt (P33590)
Pfam (PF00496)
Escherichia coliNikA
2C, D, E, Q, S...
(A, B)
ACETATE IONnon-polymer59.07Chemie (ACT)
3F
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
4G, H, I, O, P...
(A, B)
GLYCEROLnon-polymer92.18Chemie (GOL)
5J, V
(A, B)
FE (III) IONnon-polymer55.82Chemie (FE)
6K, W
(A, B)
2-[2-[carboxymethyl(phenylmethyl)amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acidnon-polymer372.42Chemie (BHZ)
7L, X
(A, B)
PEROXIDE IONnon-polymer32.02Chemie (PER)
8M, N
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
9AA, BA
(A, B)
waterwater18.0350Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight112721.5
Non-Polymers*Number of molecules24
Total formula weight2237.5
All*Total formula weight114959.0
*Water molecules are not included.

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PDB entries from 2025-12-10

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