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3MMD

Crystal structure of the W241A mutant of xylanase from Geobacillus stearothermophilus T-6 (XT6) complexed with hydrolyzed xylopentaose

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Endo-1,4-beta-xylanasepolymer37943757.51UniProt (P40943)
Pfam (PF00331)
Geobacillus stearothermophilus (Geobacillus stearothermophilus)Xylanase, 1,4-beta-D-xylan xylanohydrolase
2B
(B)
beta-D-xylopyranose-(1-4)-beta-D-xylopyranosebranched282.21In PDB
BIRD (PRD_900116)
GlyTouCan (G87728WL)
4beta-beta-xylobiose
3C
(C)
beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranosebranched414.41In PDB
BIRD (PRD_900117)
GlyTouCan (G87429QT)
4beta-beta-xylotriose
4D
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
5E, F, G
(A)
SODIUM IONnon-polymer23.03Chemie (NA)
6H, I
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
7J
(A)
waterwater18.0348Chemie (HOH)
Sequence modifications
A: 1 - 379 (UniProt: P40943)
PDBExternal DatabaseDetails
Ala 241Trp 269engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight43757.5
BranchedNumber of molecules2
Total formula weight696.6
Non-Polymers*Number of molecules6
Total formula weight205.3
All*Total formula weight44659.4
*Water molecules are not included.

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PDB entries from 2025-07-16

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