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3MKN

Crystal structure of the E. coli pyrimidine nucleosidase YeiK bound to a competitive inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Putative uncharacterized protein YeiKpolymer31634044.14UniProt (C3T3U2)
Pfam (PF01156)
Escherichia colipyrimidine nucleoside hydrolase, RihB
2E, G, I, K
(A, B, C, D)
CALCIUM IONnon-polymer40.14Chemie (CA)
3F, H, J, L
(A, B, C, D)
(2S,3S,4R,5R)-2-(3,4-diaminophenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diolnon-polymer239.34Chemie (DNB)
4M, N, O, P
(A, B, C, D)
waterwater18.0588Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 313 (UniProt: C3T3U2)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight136176.5
Non-Polymers*Number of molecules8
Total formula weight1117.4
All*Total formula weight137293.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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