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3MI5

Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E, G, I...
(A, B, C, D, E...)
Protocatechuate 3,4-dioxygenase alpha chainpolymer20022278.86UniProt (P00436)
Pfam (PF00775)
Pseudomonas putida3,4-PCD
2B, D, F, H, J...
(M, N, O, P, Q...)
Protocatechuate 3,4-dioxygenase beta chainpolymer23826696.36UniProt (P00437)
Pfam (PF12391)
Pfam (PF00775)
Pseudomonas putida3,4-PCD
3BC, CB, EC, FA, GD...
(P, O, E, B, R...)
SULFATE IONnon-polymer96.112Chemie (SO4)
4AC, AD, BA, DC, DD...
(P, F, M, R, O...)
BETA-MERCAPTOETHANOLnon-polymer78.125Chemie (BME)
5AA, AB, CD, DB, EB...
(M, C, R, O, E...)
GLYCEROLnon-polymer92.142Chemie (GOL)
6CC, DA, HD, IB, KA...
(P, M, R, O, B...)
CATECHOLnon-polymer110.112Chemie (CAQ)
7BB, BD, MA, MC, U...
(O, R, N, Q, M...)
FE (III) IONnon-polymer55.86Chemie (FE)
8CA, ID, KB, TA, TC
(M, R, O, N, Q)
CHLORIDE IONnon-polymer35.55Chemie (CL)
9KD, LD, MD, ND, OD...
(A, M, B, N, C...)
waterwater18.02300Chemie (HOH)
Sequence modifications
M, N, O, P, Q, R: 301 - 538 (UniProt: P00437)
PDBExternal DatabaseDetails
His 447Tyr 148engineered mutation
Tyr 462His 163engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight293850.6
Non-Polymers*Number of molecules102
Total formula weight8807.7
All*Total formula weight302658.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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