3M6S
Crystal structure of H1N1pdm Hemagglutinin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G, I... | Hemagglutinin | polymer | 331 | 36661.3 | 6 | UniProt (C5MV42) Pfam (PF00509) In PDB | Influenza A virus (A/Darwin/2001/2009(H1N1)) | |
2 | B, D, F, H, J... | Hemagglutinin | polymer | 181 | 20759.0 | 6 | UniProt (C5MV42) Pfam (PF00509) In PDB | Influenza A virus (A/Darwin/2001/2009(H1N1)) | |
3 | M, O, P, Q | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
4 | N | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G62182OO) | |||
5 | A, E, G | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence modifications
A, C, E, G, I, K: 1 - 327 (UniProt: C5MV42)
B, D, F, H, J, L: 1 - 178 (UniProt: C5MV42)
PDB | External Database | Details |
---|---|---|
Ala -3 | - | expression tag |
Asp -2 | - | expression tag |
Pro -1 | - | expression tag |
Gly 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 175 | Gly 519 | engineered mutation |
Gly 176 | Val 520 | engineered mutation |
Arg 177 | Lys 521 | engineered mutation |
Val 179 | - | expression tag |
Pro 180 | - | expression tag |
Arg 181 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 344522.0 | |
Branched | Number of molecules | 5 |
Total formula weight | 2284.1 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 884.8 | |
All* | Total formula weight | 347691.0 |