3M5H
Crystal structure of a H7 influenza virus hemagglutinin complexed with 3SLN
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Hemagglutinin | polymer | 317 | 34880.4 | 3 | UniProt (B7NY59) Pfam (PF00509) In PDB | Influenza A virus | |
2 | B, D, F | Hemagglutinin | polymer | 182 | 20896.0 | 3 | UniProt (B7NYS1) Pfam (PF00509) In PDB | Influenza A virus | |
3 | G, K | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 674.6 | 2 | In PDB BIRD (PRD_900067) GlyTouCan (G00065MO) | 3'-sialyl-N-acetyllactosamine | ||
4 | H, J | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
5 | I | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose | branched | 471.4 | 1 | In PDB GlyTouCan (G30207PZ) | |||
6 | A, D, E, F | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
7 | B, D, F | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
8 | water | water | 18.0 | 257 | Chemie (HOH) |
Sequence modifications
A, C, E: 10 - 330 (UniProt: B7NY59)
B, D, F: 1 - 178 (UniProt: B7NYS1)
PDB | External Database | Details |
---|---|---|
Ala 7 | - | expression tag |
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Asn 216 | Ser 221 | SEE REMARK 999 |
Thr 257 | Ala 254 | SEE REMARK 999 |
Val 309 | Ile 306 | SEE REMARK 999 |
PDB | External Database | Details |
---|---|---|
Gly 176 | Val 507 | SEE REMARK 999 |
Arg 177 | Lys 508 | SEE REMARK 999 |
Val 179 | - | expression tag |
Pro 180 | - | expression tag |
Arg 181 | - | expression tag |
Gly 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 167329.0 | |
Branched | Number of molecules | 5 |
Total formula weight | 2669.4 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1253.2 | |
All* | Total formula weight | 171251.6 |