3LY0
Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Dipeptidase AC. Metallo peptidase. MEROPS family M19 | polymer | 364 | 40166.7 | 2 | UniProt (Q3IZQ3) Pfam (PF01244) | Rhodobacter sphaeroides | |
| 2 | C, F (A, B) | (2R)-3-[(R)-[(1R)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid | non-polymer | 195.2 | 2 | Chemie (LY0) | |||
| 3 | D, E, G, H (A, B) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 4 | I, J (A, B) | water | water | 18.0 | 638 | Chemie (HOH) |
Sequence modifications
A, B: 4 - 354 (UniProt: Q3IZQ3)
| PDB | External Database | Details |
|---|---|---|
| Met -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Leu 1 | - | expression tag |
| Ser 2 | - | expression tag |
| Asp 3 | - | expression tag |
| Thr 352 | Ser 352 | conflict |
| Glu 355 | - | expression tag |
| Gly 356 | - | expression tag |
| His 357 | - | expression tag |
| His 358 | - | expression tag |
| His 359 | - | expression tag |
| His 360 | - | expression tag |
| His 361 | - | expression tag |
| His 362 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 80333.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 651.9 | |
| All* | Total formula weight | 80985.3 |






