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3LDY

An extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacI

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
restriction endonuclease PacIpolymer14215784.81UniProt (by SIFTS) (D5MNX7)Pseudomonas alcaligenes
2B
(B)
DNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*A)-3')polymer82466.61
3C
(C)
DNA (5'-D(P*AP*TP*TP*AP*AP*GP*CP*CP*TP*C)-3')polymer103004.01
4D, E
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
5F
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
6G, H
(A, C)
waterwater18.089Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight21255.5
Non-Polymers*Number of molecules3
Total formula weight170.9
All*Total formula weight21426.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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