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3KOX

Crystal Structure of ornithine 4,5 aminomutase in complex with 2,4-diaminobutyrate (Anaerobic)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E, G
(A, B, C, D)
D-ornithine aminomutase E componentpolymer76385412.24UniProt (Q8VPJ5)
Pfam (PF09043)
Pfam (PF16554)
Pfam (PF02310)
UniProt (by SIFTS) (E3PY95)
Clostridium sticklandii
2B, D, F, H
(E, F, G, H)
D-ornithine aminomutase S componentpolymer12113645.84UniProt (Q8VPJ6)
Pfam (PF16552)
UniProt (by SIFTS) (E3PY96)
Clostridium sticklandii
3I, M, P, R
(A, B, C, D)
COBALAMINnon-polymer1330.44Chemie (B12)
4J, L, O, S
(A, B, C, D)
5'-DEOXYADENOSINEnon-polymer251.24Chemie (5AD)
5K, N, Q, T
(A, B, C, D)
(2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acidnon-polymer347.34Chemie (Z98)
6AA, BA, U, V, W...
(D, H, A, E, B...)
waterwater18.0787Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 743 (UniProt: Q8VPJ5)
PDBExternal DatabaseDetails
-Ile 218SEE REMARK 999
-Asp 219SEE REMARK 999
-Gly 220SEE REMARK 999
Ser 744-expression tag
Glu 745-expression tag
Asp 746-expression tag
Pro 747-expression tag
Asn 748-expression tag
Ser 749-expression tag
Ser 750-expression tag
Ser 751-expression tag
Val 752-expression tag
Asp 753-expression tag
Lys 754-expression tag
Leu 755-expression tag
Ala 756-expression tag
Ala 757-expression tag
Ala 758-expression tag
Leu 759-expression tag
Glu 760-expression tag
His 761-expression tag
His 762-expression tag
His 763-expression tag
His 764-expression tag
His 765-expression tag
His 766-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight396232.1
Non-Polymers*Number of molecules12
Total formula weight7715.4
All*Total formula weight403947.5
*Water molecules are not included.

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PDB entries from 2025-07-02

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