3K8D
Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase in complex with CTP and 2-deoxy-Kdo
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | 3-deoxy-manno-octulosonate cytidylyltransferase | polymer | 264 | 29456.4 | 4 | UniProt (P04951) Pfam (PF02348) | Escherichia coli | CMP-KDO synthetase, CMP-2-keto-3-deoxyoctulosonic acid synthetase, CKS |
| 2 | E, H, K, N (A, B, C, D) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 3 | F, I, L, O (A, B, C, D) | 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid | non-polymer | 238.2 | 4 | Chemie (KDO) | |||
| 4 | G, J, M, P (A, B, C, D) | CYTIDINE-5'-TRIPHOSPHATE | non-polymer | 483.2 | 4 | Chemie (CTP) | |||
| 5 | Q, R, S, T (A, B, C, D) | water | water | 18.0 | 1255 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 248 (UniProt: P04951)
| PDB | External Database | Details |
|---|---|---|
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 117825.5 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2982.6 | |
| All* | Total formula weight | 120808.1 |






