3K2O
Structure of an oxygenase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 | polymer | 336 | 39897.4 | 2 | UniProt (Q6NYC1) Pfam (PF02373) | Homo sapiens (human) | Histone arginine demethylase JMJD6, Peptide-lysine 5-dioxygenase JMJD6, Lysyl-hydroxylase JMJD6, JmjC domain-containing protein 6, Jumonji domain-containing protein 6, Phosphatidylserine receptor, Protein PTDSR |
| 2 | C, I (A, B) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 3 | D, N (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | E, J, L, M, O... (A, B) | CHLORIDE ION | non-polymer | 35.5 | 6 | Chemie (CL) | |||
| 5 | F, K, Q (A, B) | PHOSPHATE ION | non-polymer | 95.0 | 3 | Chemie (PO4) | |||
| 6 | G, R (A, B) | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 7 | H (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 8 | S, T (A, B) | water | water | 18.0 | 673 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 335 (UniProt: Q6NYC1)
| PDB | External Database | Details |
|---|---|---|
| His 0 | - | expression tag |
| Mse 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 79794.9 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 871.2 | |
| All* | Total formula weight | 80666.1 |
