3JCP
Structure of yeast 26S proteasome in M2 state derived from Titan dataset
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | 1, 8 | Proteasome subunit beta type-6 | polymer | 241 | 26905.1 | 2 | UniProt (P23724) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Multicatalytic endopeptidase complex subunit C5, Proteasome component C5 |
2 | 2, 9 | Proteasome subunit beta type-7 | polymer | 266 | 29471.3 | 2 | UniProt (P30657) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PRE4, Multicatalytic endopeptidase complex subunit PRE4, Proteasome component PRE4, Proteinase YSCE subunit PRE4 |
3 | 3, h | Proteasome subunit beta type-1 | polymer | 215 | 23573.6 | 2 | UniProt (P38624) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PRE3, Multicatalytic endopeptidase complex subunit PRE3, Proteasome component PRE3, Proteinase YSCE subunit PRE3 |
4 | 4, i | Proteasome subunit beta type-2 | polymer | 261 | 28299.9 | 2 | UniProt (P25043) Pfam (PF00227) Pfam (PF12465) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PUP1, Multicatalytic endopeptidase complex subunit PUP1, Proteasome component PUP1, Proteinase YSCE subunit PUP1 |
5 | 5, j | Proteasome subunit beta type-3 | polymer | 205 | 22627.8 | 2 | UniProt (P25451) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PUP3, Multicatalytic endopeptidase complex subunit PUP3, Proteasome component PUP3 |
6 | 6, k | Proteasome subunit beta type-4 | polymer | 198 | 22545.7 | 2 | UniProt (P22141) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit C11, Multicatalytic endopeptidase complex subunit C11, Proteasome component C11, Proteinase YSCE subunit 11 |
7 | 7, l | Proteasome subunit beta type-5 | polymer | 287 | 31670.5 | 2 | UniProt (P30656) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PRE2, Multicatalytic endopeptidase complex subunit PRE2, Proteasome component PRE2, Proteinase YSCE subunit PRE2 |
8 | A, a | Proteasome subunit alpha type-1 | polymer | 252 | 28033.8 | 2 | UniProt (P21243) Pfam (PF00227) Pfam (PF10584) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit C7-alpha, Multicatalytic endopeptidase complex C7, Proteasome component C7-alpha, Proteasome component Y8, Proteinase YSCE subunit 7, SCL1 suppressor protein |
9 | B, b | Proteasome subunit alpha type-2 | polymer | 250 | 27191.8 | 2 | UniProt (P23639) Pfam (PF10584) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit Y7, Multicatalytic endopeptidase complex subunit Y7, Proteasome component Y7, Proteinase YSCE subunit 7 |
10 | C, c | Proteasome subunit alpha type-3 | polymer | 258 | 28748.2 | 2 | UniProt (P23638) Pfam (PF10584) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit Y13, Multicatalytic endopeptidase complex subunit Y13, Proteasome component Y13, Proteinase YSCE subunit 13 |
11 | D, d | Proteasome subunit alpha type-4 | polymer | 254 | 28478.1 | 2 | UniProt (P40303) Pfam (PF10584) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PRE6, Multicatalytic endopeptidase complex subunit PRE6, Proteasome component PRE6, Proteinase YSCE subunit PRE6 |
12 | E, e | Proteasome subunit alpha type-5 | polymer | 260 | 28649.1 | 2 | UniProt (P32379) Pfam (PF10584) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PUP2, Multicatalytic endopeptidase complex subunit PUP2, Proteasome component PUP2, Proteinase YSCE subunit PUP2 |
13 | F, f | Proteasome subunit alpha type-6 | polymer | 234 | 25634.0 | 2 | UniProt (P40302) Pfam (PF10584) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit PRE5, Multicatalytic endopeptidase complex subunit PRE5, Proteasome component PRE5, Proteinase YSCE subunit PRE5 |
14 | G, g | Probable proteasome subunit alpha type-7 | polymer | 288 | 31575.1 | 2 | UniProt (P21242) Pfam (PF10584) Pfam (PF00227) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Macropain subunit C1, Multicatalytic endopeptidase complex subunit C1, Proteasome component C1, Proteinase YSCE subunit 1 |
15 | H | 26S protease regulatory subunit 7 homolog | polymer | 467 | 52054.9 | 1 | UniProt (P33299) Pfam (PF21236) Pfam (PF00004) Pfam (PF17862) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Protein CIM5, Tat-binding homolog 3 |
16 | I | 26S protease regulatory subunit 4 homolog | polymer | 437 | 48898.2 | 1 | UniProt (P40327) Pfam (PF16450) Pfam (PF00004) Pfam (PF17862) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Tat-binding homolog 5 |
17 | J | 26S protease regulatory subunit 8 homolog | polymer | 405 | 45342.7 | 1 | UniProt (Q01939) Pfam (PF16450) Pfam (PF00004) Pfam (PF17862) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Protein CIM3, Protein SUG1, Tat-binding protein TBY1 |
18 | K | 26S protease regulatory subunit 6B homolog | polymer | 428 | 47953.7 | 1 | UniProt (P33298) Pfam (PF16450) Pfam (PF00004) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Protein YNT1, Tat-binding homolog 2 |
19 | L | 26S protease subunit RPT4 | polymer | 437 | 49480.1 | 1 | UniProt (P53549) Pfam (PF16450) Pfam (PF00004) Pfam (PF17862) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | 26S protease subunit SUG2, Proteasomal cap subunit |
20 | M | 26S protease regulatory subunit 6A | polymer | 434 | 48315.7 | 1 | UniProt (P33297) Pfam (PF16450) Pfam (PF00004) Pfam (PF17862) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Tat-binding protein homolog 1, TBP-1 |
21 | N | 26S proteasome regulatory subunit RPN2 | polymer | 945 | 104351.9 | 1 | UniProt (P32565) Pfam (PF21505) Pfam (PF01851) Pfam (PF13646) Pfam (PF18004) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | |
22 | O | 26S proteasome regulatory subunit RPN9 | polymer | 393 | 45839.3 | 1 | UniProt (Q04062) Pfam (PF22037) Pfam (PF01399) Pfam (PF18261) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Proteasome non-ATPase subunit 7 |
23 | P | 26S proteasome regulatory subunit RPN5 | polymer | 445 | 51840.4 | 1 | UniProt (Q12250) Pfam (PF22241) Pfam (PF01399) Pfam (PF18098) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Proteasome non-ATPase subunit 5 |
24 | Q | 26S proteasome regulatory subunit RPN6 | polymer | 434 | 49839.8 | 1 | UniProt (Q12377) Pfam (PF18055) Pfam (PF01399) Pfam (PF18503) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Proteasome non-ATPase subunit 4 |
25 | R | 26S proteasome regulatory subunit RPN7 | polymer | 429 | 49016.4 | 1 | UniProt (Q06103) Pfam (PF10602) Pfam (PF01399) Pfam (PF21154) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | |
26 | S | 26S proteasome regulatory subunit RPN3 | polymer | 523 | 60464.6 | 1 | UniProt (P40016) Pfam (PF01399) Pfam (PF08375) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | |
27 | T | 26S proteasome regulatory subunit RPN12 | polymer | 274 | 31952.1 | 1 | UniProt (P32496) Pfam (PF10075) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Nuclear integrity protein 1 |
28 | U | 26S proteasome regulatory subunit RPN8 | polymer | 338 | 38365.5 | 1 | UniProt (Q08723) Pfam (PF01398) Pfam (PF13012) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | |
29 | V | Ubiquitin carboxyl-terminal hydrolase RPN11 | polymer | 306 | 34442.3 | 1 | UniProt (P43588) Pfam (PF01398) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | 26S proteasome regulatory subunit RPN11, Protein MPR1 |
30 | W | 26S proteasome regulatory subunit RPN10 | polymer | 268 | 29776.1 | 1 | UniProt (P38886) Pfam (PF13519) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | |
31 | X | 26S proteasome regulatory subunit RPN13 | polymer | 156 | 17919.0 | 1 | UniProt (O13563) Pfam (PF04683) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | Proteasome non-ATPase subunit 13 |
32 | Y | 26S proteasome complex subunit SEM1 | polymer | 89 | 10397.1 | 1 | UniProt (O94742) Pfam (PF05160) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | |
33 | Z | 26S proteasome regulatory subunit RPN1 | polymer | 993 | 109601.9 | 1 | UniProt (P38764) Pfam (PF17781) Pfam (PF01851) Pfam (PF18051) In PDB | Saccharomyces cerevisiae S288c (Baker's yeast) | HMG-CoA reductase degradation protein 2, Proteasome non-ATPase subunit 1 |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 47 |
Total formula weight | 1692659.9 | |
All* | Total formula weight | 1692659.9 |