3J9F
Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 1 | Protein VP1 | polymer | 302 | 33488.6 | 1 | UniProt (P03300) Pfam (PF00073) In PDB | Human poliovirus 1 Mahoney | P1D, Virion protein 1 |
| 2 | 2 | Protein VP2 | polymer | 272 | 30075.8 | 1 | UniProt (P03300) Pfam (PF00073) In PDB | Human poliovirus 1 Mahoney | P1B, Virion protein 2 |
| 3 | 3 | Protein VP3 | polymer | 238 | 26547.5 | 1 | UniProt (P03300) Pfam (PF00073) In PDB | Human poliovirus 1 Mahoney | P1C, Virion protein 3 |
| 4 | 4 | Protein VP4 | polymer | 69 | 7603.4 | 1 | UniProt (P03300) Pfam (PF02226) In PDB | Human poliovirus 1 Mahoney | P1A, Virion protein 4 |
| 5 | 7 | Poliovirus receptor | polymer | 116 | 12869.6 | 1 | UniProt (P15151) Pfam (PF07686) In PDB | Homo sapiens (human) | Nectin-like protein 5, NECL-5, PVR, CD155 |
| 6 | 8 | Poliovirus receptor | polymer | 102 | 10999.5 | 1 | UniProt (P15151) Pfam (PF08205) In PDB | Homo sapiens (human) | Nectin-like protein 5, NECL-5, PVR, CD155 |
| 7 | 9 | Poliovirus receptor | polymer | 92 | 9952.1 | 1 | UniProt (P15151) In PDB | Homo sapiens (human) | Nectin-like protein 5, NECL-5, PVR, CD155 |
| 8 | A, E | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 9 | B | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G42466VF) | |||
| 10 | C, D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 11 | F | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 12 | 1 | PALMITIC ACID | non-polymer | 256.4 | 1 | Chemie (PLM) | |||
| 13 | 9 | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
3: 1 - 238 (UniProt: P03300)
4: 2 - 69 (UniProt: P03300)
| PDB | External Database | Details |
|---|---|---|
| Ser 123 | Phe 464 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Myr 1 | - | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 131536.4 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 3649.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 477.6 | |
| All* | Total formula weight | 135663.5 |
