3J3Y

Atomic-level structure of the entire HIV-1 capsid (186 hexamers + 12 pentamers)

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, AA, AAA, AB, ABA... (g8, g9, ga, gb, gc...)	capsid protein	polymer	231	25702.5	1176	UniProt (Q79791) Pfam (PF00607) Pfam (PF19317)	Human immunodeficiency virus 1 (HIV-1)	CA

Sequence modifications

g8, g9, ga, gb, gc, gd, ge, gf, gg, gh, 1C, gi, gj, gk, gl, gm, gn, go, gp, gq, gr, 1D, gs, gt, gu, gv, gw, gx, gy, gz, gA, gB, 1E, gC, gD, gE, gF, gG, gH, gI, gJ, gK, gL, 1F, gM, gN, gO, gP, gQ, gR, gS, gT, gU, gV, 1G, gW, gX, gY, gZ, h0, h1, h2, h3, h4, h5, 1H, h6, h7, h8, h9, ha, hb, hc, hd, he, hf, 1I, hg, hh, hi, hj, hk, hl, hm, hn, ho, hp, 1J, hq, hr, hs, ht, hu, hv, hw, hx, hy, hz, 1K, hA, hB, hC, hD, hE, hF, hG, hH, hI, hJ, 1L, hK, hL, hM, hN, hO, hP, hQ, hR, hS, hT, 1M, hU, hV, hW, hX, hY, hZ, i0, i1, i2, i3, 1N, i4, i5, i6, i7, i8, i9, ia, ib, ic, id, 1O, ie, if, ig, ih, ii, ij, ik, il, im, in, 1P, io, ip, iq, ir, is, it, iu, iv, iw, ix, 1Q, iy, iz, iA, iB, iC, iD, iE, iF, iG, iH, 1R, iI, iJ, iK, iL, iM, iN, iO, iP, iQ, iR, 1S, iS, iT, iU, iV, iW, iX, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 2a, 2b, 2c, 2d, 2e, 2f, 2g, 2h, 2i, 2j, 2k, 2l, 2m, 2n, 2o, 2p, 2q, 2r, 2s, 2t, 2u, 2v, 2w, 2x, 2y, 2z, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2H, 2I, 2J, 2K, 2L, 2M, 2N, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 3a, 3b, 3c, 3d, 3e, 3f, 3g, 3h, 3i, 3j, 3k, 3l, 3m, 3n, 3o, 3p, 3q, 3r, 3s, 3t, 3u, 3v, 3w, 3x, 3y, 3z, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3H, 3I, 3J, 3K, 3L, 3M, 3N, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 4a, 4b, 4c, 4d, 4e, 4f, 4g, 4h, 4i, 4j, 4k, 4l, 4m, 4n, 4o, 4p, 4q, 4r, 4s, 4t, 4u, 4v, 4w, 4x, 4y, 4z, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4H, 4I, 4J, 4K, 4L, 4M, 4N, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 5a, 5b, 5c, 5d, 5e, 5f, 5g, 5h, 5i, 5j, 5k, 5l, 5m, 5n, 5o, 5p, 5q, 5r, 5s, 5t, 5u, 5v, 5w, 5x, 5y, 5z, 5A, 5B, 5C, 5D, 5E, 5F, 5G, 5H, 5I, 5J, 5K, 5L, 5M, 5N, 5O, 5P, 5Q, 5R, 5S, 5T, 5U, 5V, 5W, 5X, 5Y, 5Z, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 6a, 6b, 6c, 6d, 6e, 6f, 6g, 6h, 6i, 6j, 6k, 6l, 6m, 6n, 6o, 6p, 6q, 6r, 6s, 6t, 6u, 6v, 6w, 6x, 6y, 6z, 6A, 6B, 6C, 6D, 6E, 6F, 6G, 6H, 6I, 6J, 6K, 6L, 6M, 6N, 6O, 6P, 6Q, 6R, 6S, 6T, 6U, 6V, 6W, 6X, 6Y, 6Z, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 7a, 7b, 7c, 7d, 7e, 7f, 7g, 7h, 7i, 7j, 7k, 7l, 7m, 7n, 7o, 7p, 7q, 7r, 7s, 7t, 7u, 7v, 7w, 7x, 7y, 7z, 7A, 7B, 7C, 7D, 7E, 7F, 7G, 7H, 7I, 7J, 7K, 7L, 7M, 7N, 7O, 7P, 7Q, 7R, 7S, 7T, 7U, 7V, 7W, 7X, 7Y, 7Z, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 8a, 8b, 8c, 8d, 8e, 8f, 8g, 8h, 8i, 8j, 8k, 8l, 8m, 8n, 8o, 8p, 8q, 8r, 8s, 8t, 8u, 8v, 8w, 8x, 8y, 8z, 8A, 8B, 8C, 8D, 8E, 8F, 8G, 8H, 8I, 8J, 8K, 8L, 8M, 8N, 8O, 8P, 8Q, 8R, 8S, 8T, 8U, 8V, 8W, 8X, 8Y, 8Z, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 9a, 9b, 9c, 9d, 9e, 9f, 9g, 9h, 9i, 9j, 9k, 9l, 9m, 9n, 9o, 9p, 9q, 9r, 9s, 9t, 9u, 9v, 9w, 9x, 9y, 9z, 9A, 9B, 9C, 9D, 9E, 9F, 9G, 9H, 9I, 9J, 9K, 9L, 9M, 9N, 9O, 9P, Y, 9Q, 9R, 9S, 9T, 9U, 9V, 9W, 9X, 9Y, 9Z, Z, a0, a1, a2, a3, a4, a5, a6, a7, a8, a9, 10, aa, ab, ac, ad, ae, af, ag, ah, ai, aj, 11, ak, al, am, an, ao, ap, aq, ar, as, at, 12, au, av, aw, ax, ay, az, aA, aB, aC, aD, 13, aE, aF, aG, aH, aI, aJ, aK, aL, aM, aN, 14, aO, aP, aQ, aR, aS, aT, aU, aV, aW, aX, 15, aY, aZ, b0, b1, b2, b3, b4, b5, b6, b7, 16, b8, b9, ba, bb, bc, bd, be, bf, bg, bh, 17, bi, bj, bk, bl, bm, bn, bo, bp, bq, br, 18, bs, bt, bu, bv, bw, bx, by, bz, bA, bB, 19, bC, bD, bE, bF, bG, bH, bI, bJ, bK, bL, 1a, bM, bN, bO, bP, bQ, bR, bS, bT, bU, bV, 1b, bW, bX, bY, bZ, c0, c1, c2, c3, c4, c5, 1c, c6, c7, c8, c9, ca, cb, cc, cd, ce, cf, 1d, cg, ch, ci, cj, ck, cl, cm, cn, co, cp, 1e, cq, cr, cs, ct, cu, cv, cw, cx, cy, cz, 1f, cA, cB, cC, cD, cE, cF, cG, cH, cI, cJ, 1g, cK, cL, cM, cN, cO, cP, cQ, cR, cS, cT, 1h, cU, cV, cW, cX, cY, cZ, d0, d1, d2, d3, 1i, d4, d5, d6, d7, d8, d9, da, db, dc, dd, 1j, de, df, dg, dh, di, dj, dk, dl, dm, dn, 1k, do, dp, dq, dr, ds, dt, du, dv, dw, dx, 1l, dy, dz, dA, dB, dC, dD, dE, dF, dG, dH, 1m, dI, dJ, dK, dL, dM, dN, dO, dP, dQ, dR, 1n, dS, dT, dU, dV, dW, dX, dY, dZ, e0, e1, 1o, e2, e3, e4, e5, e6, e7, e8, e9, ea, eb, 1p, ec, ed, ee, ef, eg, eh, ei, ej, ek, el, 1q, em, en, eo, ep, eq, er, es, et, eu, ev, 1r, ew, ex, ey, ez, eA, eB, eC, eD, eE, eF, 1s, eG, eH, eI, eJ, eK, eL, eM, eN, eO, eP, 1t, eQ, eR, eS, eT, eU, eV, eW, eX, eY, eZ, 1u, f0, f1, f2, f3, f4, f5, f6, f7, f8, f9, 1v, fa, fb, fc, fd, fe, ff, fg, fh, fi, fj, 1w, fk, fl, fm, fn, fo, fp, fq, fr, fs, ft, 1x, fu, fv, fw, fx, fy, fz, fA, fB, fC, fD, 1y, fE, fF, fG, fH, fI, fJ, fK, fL, fM, fN, 1z, fO, fP, fQ, fR, fS, fT, fU, fV, fW, fX, 1A, fY, fZ, g0, g1, g2, g3, g4, g5, g6, g7, 1B, 0, a, b, c, d, e, f, g, h, i, j, 1, k, l, m, n, o, p, q, r, s, t, 2, u, v, w, x, y, z, A, B, C, D, 3, E, F, G, H, I, J, K, L, M, N, 4, O, P, Q, R, S, T, U, V, W, X, 5, 6, 7, 8, 9: 1 - 231 (UniProt: Q79791)

PDB	External Database	Details
Glu 92	Ala 224	engineered mutation

Contents of the asymmetric unit

Polymers	Number of chains	1176
	Total formula weight	30226128.2
All*	Total formula weight	30226128.2

*Water molecules are not included.