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3IDX

Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C222

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(G)
HIV-1 HxBc2 gp120 corepolymer31735126.91Pfam (PF00516)
UniProt (by SIFTS) (P04578)
Human immunodeficiency virus 1
2B
(H)
Fab b13 heavy chainpolymer23124810.91Homo sapiens (human)
3C
(L)
Fab b13 light chainpolymer21523639.11Homo sapiens (human)
4D, E, F, G, H...
(G)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.216Chemie (NAG)
5T, Z
(G, H)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.32Chemie (EPE)
6U, V, W, X
(G)
SULFATE IONnon-polymer96.14Chemie (SO4)
7Y
(G)
GLYCEROLnon-polymer92.11Chemie (GOL)
8AA, BA, CA
(G, H, L)
waterwater18.0233Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight83576.9
Non-Polymers*Number of molecules23
Total formula weight4492.3
All*Total formula weight88069.2
*Water molecules are not included.

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PDB entries from 2026-01-14

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