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3IB0

Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of C-lobe complex with diclofenac

Replaces:  2B6DReplaces:  3HWV
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ALactotransferrinpolymer34537655.51UniProt (P24627)
Pfam (PF00405)
In PDB
Bos taurus (Bovine)Lactoferrin, Lactoferricin-B, Lfcin-B
2B2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
3Calpha-D-mannopyranose-(1-4)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.81In PDB
GlyTouCan (G42402GU)
4Dalpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1073.01In PDB
GlyTouCan (G62783KT)
5AFE (III) IONnon-polymer55.81Chemie (FE)
6ACARBONATE IONnon-polymer60.01Chemie (CO3)
7A2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACIDnon-polymer296.11Chemie (DIF)
8ASULFATE IONnon-polymer96.12Chemie (SO4)
9AZINC IONnon-polymer65.42Chemie (ZN)
10AETHANOLnon-polymer46.11Chemie (EOH)
11waterwater18.0509Chemie (HOH)
Sequence modifications
A: 342 - 686 (UniProt: P24627)
PDBExternal DatabaseDetails
Lys 565Asn 584SEE SEQUENCE DETAILS
Glu 608Lys 627SEE SEQUENCE DETAILS
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight37655.5
BranchedNumber of molecules3
Total formula weight2408.2
Non-Polymers*Number of molecules8
Total formula weight781.0
All*Total formula weight40844.7
*Water molecules are not included.

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PDB entries from 2024-08-28

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