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3HWF

Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Fe-TrenCam2-hopo

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Neutrophil gelatinase-associated lipocalinpolymer19822598.03UniProt (P80188)
Pfam (PF00061)
Homo sapiens (human)NGAL, p25, 25 kDa alpha-2-microglobulin-related subunit of MMP-9, Lipocalin-2, Oncogene 24p3
2D, K, N
(A, B, C)
FE (III) IONnon-polymer55.83Chemie (FE)
3E, F, O, P
(A, C)
SULFATE IONnon-polymer96.14Chemie (SO4)
4G, J, L, U
(A, B, C)
SODIUM IONnon-polymer23.04Chemie (NA)
5H, M, Q
(A, B, C)
N-{2-[bis(2-{[(2,3-dihydroxyphenyl)carbonyl]amino}ethyl)amino]ethyl}-1-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxamidenon-polymer555.53Chemie (TC2)
6I, R
(A, C)
CHLORIDE IONnon-polymer35.52Chemie (CL)
7S, T, V
(C)
GLYCEROLnon-polymer92.13Chemie (GOL)
8W, X, Y
(A, B, C)
waterwater18.017Chemie (HOH)
Sequence modifications
A, B, C: -19 - 178 (UniProt: P80188)
PDBExternal DatabaseDetails
Ser 87Cys 107engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight67793.9
Non-Polymers*Number of molecules19
Total formula weight2657.5
All*Total formula weight70451.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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