3GMQ

Structure of mouse CD1d expressed in SF9 cells, no ligand added

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	T-cell surface glycoprotein CD1d1	polymer	287	32776.8	1	UniProt (P11609) Pfam (PF16497) Pfam (PF07654) In PDB	Mus musculus (mouse)
2	B	Beta-2 microglobulin	polymer	99	11660.4	1	UniProt (Q91XJ8) Pfam (PF07654) UniProt (by SIFTS) (P01887) In PDB	Mus musculus (mouse)
3	C	alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		910.8	1	In PDB GlyTouCan (G42227JK)
4	D	alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		1057.0	1	In PDB GlyTouCan (G82348BZ)
5	A	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	1	Chemie (NAG)
6	A	PALMITIC ACID	non-polymer		256.4	1	Chemie (PLM)
7	A, B	1,2-ETHANEDIOL	non-polymer		62.1	4	Chemie (EDO)
8		water	water		18.0	232	Chemie (HOH)

Sequence modifications

A: 1 - 279 (UniProt: P11609)

PDB	External Database	Details
His 201	Asp 219	SEE REMARK 999
Gly 280	-	expression tag
Ser 281	-	expression tag
His 282	-	expression tag
His 283	-	expression tag
His 284	-	expression tag
His 285	-	expression tag
His 286	-	expression tag
His 287	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	44437.1
Branched	Number of molecules	2
	Total formula weight	1967.8
Non-Polymers*	Number of molecules	6
	Total formula weight	725.9
All*	Total formula weight	47130.8

*Water molecules are not included.