3G4S
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 0 | 23S ribosomal RNA | polymer | 2923 | 946463.5 | 1 | GenBank (55229667) | Haloarcula marismortui | |
| 2 | A | 50S ribosomal protein L2P | polymer | 237 | 24980.3 | 1 | UniProt (P20276) Pfam (PF00181) Pfam (PF03947) In PDB | Haloarcula marismortui | Hmal2, Hl4 |
| 3 | B | 50S ribosomal protein L3P | polymer | 337 | 37265.2 | 1 | UniProt (P20279) Pfam (PF00297) In PDB | Haloarcula marismortui | Hmal3, Hl1 |
| 4 | C | 50S ribosomal protein L4P | polymer | 246 | 26457.1 | 1 | UniProt (P12735) Pfam (PF00573) In PDB | Haloarcula marismortui | Hmal4, Hl6 |
| 5 | D | 50S ribosomal protein L5P | polymer | 177 | 19551.7 | 1 | UniProt (P14124) Pfam (PF00281) Pfam (PF00673) In PDB | Haloarcula marismortui | Hmal5, Hl13 |
| 6 | E | 50S ribosomal protein L6P | polymer | 172 | 19316.0 | 1 | UniProt (P14135) Pfam (PF00347) In PDB | Haloarcula marismortui | Hmal6, Hl10 |
| 7 | F | 50S ribosomal protein L7Ae | polymer | 119 | 12660.7 | 1 | UniProt (P12743) Pfam (PF01248) In PDB | Haloarcula marismortui | Hs6 |
| 8 | G | 50S ribosomal protein L10 | polymer | 348 | 37169.8 | 1 | UniProt (P15825) Pfam (PF00466) Pfam (PF17777) In PDB | Haloarcula marismortui | Ribosomal protein L10, Acidic ribosomal protein P0 homolog, L10E, HMal10 |
| 9 | H | 50S ribosomal protein L10e | polymer | 177 | 19942.7 | 1 | UniProt (P60617) Pfam (PF00252) In PDB | Haloarcula marismortui | |
| 10 | I | 50S ribosomal protein L11P | polymer | 70 | 7408.1 | 1 | UniProt (P14122) Pfam (PF00298) In PDB | Haloarcula marismortui | Hmal11 |
| 11 | J | 50S ribosomal protein L13P | polymer | 142 | 15931.8 | 1 | UniProt (P29198) Pfam (PF00572) In PDB | Haloarcula marismortui | Hmal13 |
| 12 | K | 50S ribosomal protein L14P | polymer | 132 | 14216.2 | 1 | UniProt (P22450) Pfam (PF00238) In PDB | Haloarcula marismortui | Hmal14, Hl27 |
| 13 | L | 50S ribosomal protein L15P | polymer | 165 | 18005.4 | 1 | UniProt (P12737) Pfam (PF00828) In PDB | Haloarcula marismortui | Hmal15, Hl9 |
| 14 | M | 50S ribosomal protein L15e | polymer | 194 | 22143.9 | 1 | UniProt (P60618) Pfam (PF00827) In PDB | Haloarcula marismortui | 50S ribosomal protein LC12 |
| 15 | N | 50S ribosomal protein L18P | polymer | 186 | 20509.7 | 1 | UniProt (P14123) Pfam (PF17144) In PDB | Haloarcula marismortui | Hmal18, Hl12 |
| 16 | O | 50S ribosomal protein L18e | polymer | 115 | 12307.7 | 1 | UniProt (P12733) Pfam (PF00828) In PDB | Haloarcula marismortui | Hl29, L19 |
| 17 | P | 50S ribosomal protein L19e | polymer | 143 | 16169.9 | 1 | UniProt (P14119) Pfam (PF01280) In PDB | Haloarcula marismortui | Hmal19, Hl24 |
| 18 | Q | 50S ribosomal protein L21e | polymer | 95 | 10436.6 | 1 | UniProt (P12734) Pfam (PF01157) In PDB | Haloarcula marismortui | Hl31 |
| 19 | R | 50S ribosomal protein L22P | polymer | 150 | 16363.3 | 1 | UniProt (P10970) Pfam (PF00237) In PDB | Haloarcula marismortui | Hmal22, Hl23 |
| 20 | S | 50S ribosomal protein L23P | polymer | 81 | 9178.0 | 1 | UniProt (P12732) Pfam (PF00276) In PDB | Haloarcula marismortui | Hmal23, Hl25, L21 |
| 21 | T | 50S ribosomal protein L24P | polymer | 119 | 13539.8 | 1 | UniProt (P10972) Pfam (PF16906) Pfam (PF00467) In PDB | Haloarcula marismortui | Hmal24, Hl16, Hl15 |
| 22 | U | 50S ribosomal protein L24e | polymer | 53 | 5919.4 | 1 | UniProt (P14116) Pfam (PF01246) In PDB | Haloarcula marismortui | Hl21/Hl22 |
| 23 | V | 50S ribosomal protein L29P | polymer | 65 | 7145.1 | 1 | UniProt (P10971) Pfam (PF00831) In PDB | Haloarcula marismortui | Hmal29, Hl33 |
| 24 | W | 50S ribosomal protein L30P | polymer | 154 | 17062.9 | 1 | UniProt (P14121) Pfam (PF00327) In PDB | Haloarcula marismortui | Hmal30, Hl20, Hl16 |
| 25 | X | 50S ribosomal protein L31e | polymer | 82 | 9315.5 | 1 | UniProt (P18138) Pfam (PF01198) In PDB | Haloarcula marismortui | L34, Hl30 |
| 26 | Y | 50S ribosomal protein L32e | polymer | 142 | 16079.0 | 1 | UniProt (P12736) Pfam (PF01655) In PDB | Haloarcula marismortui | Hl5 |
| 27 | Z | 50S ribosomal protein L37Ae | polymer | 73 | 8224.1 | 1 | UniProt (P60619) Pfam (PF01780) In PDB | Haloarcula marismortui | |
| 28 | 1 | 50S ribosomal protein L37e | polymer | 56 | 6199.0 | 1 | UniProt (P32410) Pfam (PF01907) In PDB | Haloarcula marismortui | L35e |
| 29 | 2 | 50S ribosomal protein L39e | polymer | 50 | 6133.1 | 1 | UniProt (P22452) Pfam (PF00832) In PDB | Haloarcula marismortui | Hl39e, Hl46e |
| 30 | 3 | 50S ribosomal protein L44E | polymer | 92 | 10815.2 | 1 | UniProt (P32411) Pfam (PF00935) In PDB | Haloarcula marismortui | La, Hla |
| 31 | 9 | 5S ribosomal RNA | polymer | 122 | 39303.4 | 1 | GenBank (6468293) | Haloarcula marismortui | |
| 32 | 0, B, T, C, Y... | MAGNESIUM ION | non-polymer | 24.3 | 93 | Chemie (MG) | |||
| 33 | 0 | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 34 | 0, R, S, C, J... | SODIUM ION | non-polymer | 23.0 | 75 | Chemie (NA) | |||
| 35 | 0, A, R, B, Y... | CHLORIDE ION | non-polymer | 35.5 | 22 | Chemie (CL) | |||
| 36 | 0, A, R, S, B... | STRONTIUM ION | non-polymer | 87.6 | 108 | Chemie (SR) | |||
| 37 | 0 | TIAMULIN | non-polymer | 493.7 | 1 | Chemie (MUL) | |||
| 38 | U, Z, 1, 3, O | CADMIUM ION | non-polymer | 112.4 | 5 | Chemie (CD) | |||
| 39 | water | water | 18.0 | 7822 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 31 |
| Total formula weight | 1446214.1 | |
| Non-Polymers* | Number of molecules | 305 |
| Total formula weight | 15322.4 | |
| All* | Total formula weight | 1461536.5 |
