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3FEG

Crystal structure of human choline kinase beta in complex with phosphorylated hemicholinium-3 and adenosine nucleotide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Choline/ethanolamine kinasepolymer37944002.61UniProt (Q9Y259)
Pfam (PF01633)
Homo sapiens (human)Choline kinase beta, CK, Ethanolamine kinase, EK
2B
(A)
(2S)-2-[4'-({dimethyl[2-(phosphonooxy)ethyl]ammonio}acetyl)biphenyl-4-yl]-2-hydroxy-4,4-dimethylmorpholin-4-iumnon-polymer494.51Chemie (HC7)
3C
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
4D
(A)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.21Chemie (ADP)
5E
(A)
ADENOSINE MONOPHOSPHATEnon-polymer347.21Chemie (AMP)
6F
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
7G, H
(A)
UNKNOWN ATOM OR IONnon-polymer2Chemie (UNX)
8I
(A)
waterwater18.0298Chemie (HOH)
Sequence modifications
A: 35 - 395 (UniProt: Q9Y259)
PDBExternal DatabaseDetails
Gly 17-expression tag
Ser 18-expression tag
Ser 19-expression tag
His 20-expression tag
His 21-expression tag
His 22-expression tag
His 23-expression tag
His 24-expression tag
His 25-expression tag
Ser 26-expression tag
Ser 27-expression tag
Gly 28-expression tag
Leu 29-expression tag
Val 30-expression tag
Pro 31-expression tag
Arg 32-expression tag
Gly 33-expression tag
Ser 34-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight44002.6
Non-Polymers*Number of molecules7
Total formula weight1389.3
All*Total formula weight45391.9
*Water molecules are not included.

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PDB entries from 2025-07-02

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