3FDS
Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA polymerase IV | polymer | 352 | 40257.9 | 1 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) | Sulfolobus solfataricus | Pol IV |
| 2 | B (C) | DNA polymerase sliding clamp B | polymer | 249 | 27521.7 | 1 | UniProt (P57766) Pfam (PF00705) | Sulfolobus solfataricus | Proliferating cell nuclear antigen homolog B, PCNA B |
| 3 | C (D) | DNA polymerase sliding clamp C | polymer | 245 | 27477.2 | 1 | UniProt (Q97Z84) Pfam (PF00705) Pfam (PF02747) | Sulfolobus solfataricus | Proliferating cell nuclear antigen homolog C, PCNA C |
| 4 | AA, BA, CA, D, DA... (C, A, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 26 | Chemie (EDO) | |||
| 5 | FA, T (C, A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 6 | U (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 7 | GA, HA, V (C, A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 8 | JA (D) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 9 | KA, LA, MA (A, C, D) | water | water | 18.0 | 317 | Chemie (HOH) |
Sequence modifications
C: 1 - 249 (UniProt: P57766)
D: 2 - 245 (UniProt: Q97Z84)
| PDB | External Database | Details |
|---|---|---|
| Val 2 | Phe 2 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 95256.8 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 2490.7 | |
| All* | Total formula weight | 97747.5 |
