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3FBF

Crystal structure of the Mimivirus NDK N62L mutant complexed with dTDP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...Nucleoside diphosphate kinasepolymer14216300.56UniProt (Q5UQL3)
Pfam (PF00334)
In PDB
Acanthamoeba polyphaga mimivirusNDP kinase, NDK
2A, B, C, D, E...MAGNESIUM IONnon-polymer24.36Chemie (MG)
3A, B, C, D, E...THYMIDINE-5'-DIPHOSPHATEnon-polymer402.26Chemie (TYD)
4waterwater18.0143Chemie (HOH)
Sequence modifications
A, B, C, D, E, F: 2 - 137 (UniProt: Q5UQL3)
PDBExternal DatabaseDetails
Tyr -4-expression tag
Lys -3-expression tag
Lys -2-expression tag
Ala -1-expression tag
Gly 0-expression tag
Leu 1-expression tag
Leu 62Asn 62engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight97803.3
Non-Polymers*Number of molecules12
Total formula weight2559.0
All*Total formula weight100362.3
*Water molecules are not included.

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PDB entries from 2024-09-18

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