3F0F
Co-crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei with hydrolyzed CDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | polymer | 183 | 19487.1 | 3 | UniProt (Q63T71) Pfam (PF02542) UniProt (by SIFTS) (Q3JRA0) | Burkholderia pseudomallei (Pseudomonas pseudomallei) | MECPS, MECDP-synthase |
| 2 | D (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 3 | E (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 4 | F, G, I (A, B, C) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 5 | H (C) | CYTIDINE-5'-MONOPHOSPHATE | non-polymer | 323.2 | 1 | Chemie (C5P) | |||
| 6 | J, K, L (A, B, C) | water | water | 18.0 | 203 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 162 (UniProt: Q63T71)
| PDB | External Database | Details |
|---|---|---|
| Met -20 | - | expression tag |
| Ala -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| Met -12 | - | expression tag |
| Gly -11 | - | expression tag |
| Thr -10 | - | expression tag |
| Leu -9 | - | expression tag |
| Glu -8 | - | expression tag |
| Ala -7 | - | expression tag |
| Gln -6 | - | expression tag |
| Thr -5 | - | expression tag |
| Gln -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 58461.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 635.8 | |
| All* | Total formula weight | 59097.2 |
