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3F07

Crystal Structure Analysis of Human HDAC8 complexed with APHA in a new monoclinic crystal form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Histone deacetylase 8polymer38843174.93UniProt (Q9BY41)
Pfam (PF00850)
Homo sapiens (Human)HD8
2D, G, I, M
(A, B, C)
ZINC IONnon-polymer65.44Chemie (ZN)
3E, F, J, K, N...
(A, B, C)
POTASSIUM IONnon-polymer39.16Chemie (K)
4H, L
(A, B)
(2E)-N-hydroxy-3-[1-methyl-4-(phenylacetyl)-1H-pyrrol-2-yl]prop-2-enamidenon-polymer284.32Chemie (AGE)
5P, Q, R
(A, B, C)
waterwater18.014Chemie (HOH)
Sequence modifications
A, B, C: 1 - 377 (UniProt: Q9BY41)
PDBExternal DatabaseDetails
Ile 378-expression tag
Glu 379-expression tag
Gly 380-expression tag
Arg 381-expression tag
Ser 382-expression tag
His 383-expression tag
His 384-expression tag
His 385-expression tag
His 386-expression tag
His 387-expression tag
His 388-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight129524.8
Non-Polymers*Number of molecules12
Total formula weight1064.8
All*Total formula weight130589.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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