3ESJ
Crystal structure of 2C-methyl-D-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | polymer | 165 | 17576.3 | 1 | UniProt (P62617) Pfam (PF02542) | Escherichia coli K-12 | MECPS, MECDP-synthase |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | C (A) | 4-amino-1-[(2S,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxidotetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]pyrimidin-2(1H)-one | non-polymer | 305.2 | 1 | Chemie (CC7) PubChem (3010101) PubChem (19236) PubChem (193269) PubChem (3632205) PubChem (92855818) PubChem (92935812) PubChem (12941655) PubChem (117947283) | |||
| 4 | D (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) | |||
| 5 | E (A) | GERANYL DIPHOSPHATE | non-polymer | 314.2 | 1 | Chemie (GPP) PubChem (734) PubChem (445995) PubChem (5280528) | |||
| 6 | F (A) | water | water | 18.0 | 97 | Chemie (HOH) |
Sequence modifications
A: 1 - 159 (UniProt: P62617)
| PDB | External Database | Details |
|---|---|---|
| Gly -5 | - | expression tag |
| Ser -4 | - | expression tag |
| His -3 | - | expression tag |
| Met -2 | - | expression tag |
| Leu -1 | - | expression tag |
| Glu 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 17576.3 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 709.1 | |
| All* | Total formula weight | 18285.4 |
