3ELC
Crystal structure of 2C-methyl-D-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | polymer | 165 | 17576.3 | 3 | UniProt (P62617) Pfam (PF02542) | Escherichia coli K-12 | MECPS, MECDP-synthase |
| 2 | D, F, H (A, B, C) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 3 | E, G, I (A, B, C) | 4-amino-1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-fluoro-pyrimidin-2-one | non-polymer | 261.2 | 3 | Chemie (F01) PubChem (16861) PubChem (20285) PubChem (352938) PubChem (27282590) PubChem (29980301) PubChem (460517) PubChem (488400) PubChem (488403) PubChem (488404) PubChem (46875049) PubChem (54669721) PubChem (56995292) PubChem (57416888) PubChem (59051498) PubChem (60024155) PubChem (68613908) PubChem (69534967) PubChem (12896821) PubChem (102290077) PubChem (134694098) PubChem (171699328) | |||
| 4 | J (C) | GERANYL DIPHOSPHATE | non-polymer | 314.2 | 1 | Chemie (GPP) PubChem (734) PubChem (445995) PubChem (5280528) | |||
| 5 | K, L, M (A, B, C) | water | water | 18.0 | 113 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 159 (UniProt: P62617)
| PDB | External Database | Details |
|---|---|---|
| Gly -5 | - | expression tag |
| Ser -4 | - | expression tag |
| His -3 | - | expression tag |
| Met -2 | - | expression tag |
| Leu -1 | - | expression tag |
| Glu 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 52728.8 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1294.1 | |
| All* | Total formula weight | 54022.9 |
