3EI1
Structure of hsDDB1-drDDB2 bound to a 14 bp 6-4 photoproduct containing DNA-duplex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA damage-binding protein 1 | polymer | 1158 | 129253.9 | 1 | UniProt (Q16531) Pfam (PF10433) Pfam (PF03178) In PDB | Homo sapiens (Human) | hsDDB1, Damage-specific DNA-binding protein 1, UV-damaged DNA-binding factor, DDB p127 subunit, DNA damage-binding protein a, DDBa, UV-damaged DNA-binding protein 1, UV-DDB 1, Xeroderma pigmentosum group E-complementing protein, XPCe, XPE-binding factor, XPE-BF, HBV X-associated protein 1, XAP-1 |
2 | B | DNA damage-binding protein 2 | polymer | 383 | 43559.1 | 1 | UniProt (Q2YDS1) Pfam (PF00400) In PDB | Danio rerio (Zebrafish) | Damage-specific DNA-binding protein 2 |
3 | G | 5'-D(*DAP*DCP*DGP*DCP*DGP*DAP*(64T)P*(5PY)P*DGP*DCP*DGP*DCP*DCP*DC)-3' | polymer | 14 | 4243.8 | 1 | |||
4 | H | 5'-D(*DTP*DGP*DGP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DGP*DCP*DG)-3' | polymer | 14 | 4321.8 | 1 | |||
5 | A | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
6 | water | water | 18.0 | 193 | Chemie (HOH) |
Sequence modifications
A: 1 - 1140 (UniProt: Q16531)
B: 94 - 457 (UniProt: Q2YDS1)
PDB | External Database | Details |
---|---|---|
Met -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
Arg -10 | - | expression tag |
Arg -9 | - | expression tag |
Leu -8 | - | expression tag |
Val -7 | - | expression tag |
Pro -6 | - | expression tag |
Arg -5 | - | expression tag |
Gly -4 | - | expression tag |
Ser -3 | - | expression tag |
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Arg 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 75 | - | expression tag |
His 76 | - | expression tag |
His 77 | - | expression tag |
His 78 | - | expression tag |
His 79 | - | expression tag |
His 80 | - | expression tag |
His 81 | - | expression tag |
Val 82 | - | expression tag |
Asp 83 | - | expression tag |
Glu 84 | - | expression tag |
Asn 85 | - | expression tag |
Leu 86 | - | expression tag |
Tyr 87 | - | expression tag |
Phe 88 | - | expression tag |
Gln 89 | - | expression tag |
Gly 90 | - | expression tag |
Gly 91 | - | expression tag |
Gly 92 | - | expression tag |
Arg 93 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 181378.6 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 194.2 | |
All* | Total formula weight | 181572.8 |