3E6J
Crystal Structure of Variable Lymphocyte Receptor (VLR) RBC36 in Complex with H-trisaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Variable lymphocyte receptor diversity region | polymer | 229 | 25219.8 | 1 | Pfam (PF13855) Pfam (PF11921) UniProt (by SIFTS) (Q2VGE8) | Petromyzon marinus (marine lamprey) | |
| 2 | B (B) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 529.5 | 1 | In PDB BIRD (PRD_900036) GlyTouCan (G61459JW) | H type 2 antigen, beta anomer | ||
| 3 | C, D, E, F, G (A) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
| 4 | H (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 5 | I (A) | water | water | 18.0 | 330 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 25219.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 529.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 572.4 | |
| All* | Total formula weight | 26321.7 |
