3DTB
The structure of rat cytosolic PEPCK in complex with phosphoglycolate and GDP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | polymer | 624 | 69643.8 | 2 | UniProt (P07379) Pfam (PF17297) Pfam (PF00821) | Rattus norvegicus (brown rat rat rats) | PEPCK-C, Phosphoenolpyruvate carboxylase |
| 2 | C, L (A, B) | 2-PHOSPHOGLYCOLIC ACID | non-polymer | 156.0 | 2 | Chemie (PGA) PubChem (529) | |||
| 3 | D, E, M, N (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) PubChem (27854) | |||
| 4 | F, O (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) PubChem (923) | |||
| 5 | G (A) | BICARBONATE ION | non-polymer | 61.0 | 1 | Chemie (BCT) PubChem (769) | |||
| 6 | H, P (A, B) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 2 | Chemie (GDP) PubChem (136073927) PubChem (135398619) PubChem (135402030) PubChem (135431654) PubChem (135566337) PubChem (135760556) PubChem (136026707) PubChem (136053418) PubChem (136663964) PubChem (136664748) PubChem (136759848) PubChem (136759849) PubChem (136759850) PubChem (136836636) PubChem (136847074) PubChem (172898537) | |||
| 7 | I, J (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 2 | Chemie (1PE) PubChem (62551) | |||
| 8 | K (A) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) PubChem (23831) | |||
| 9 | Q, R (A, B) | water | water | 18.0 | 1544 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 622 (UniProt: P07379)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 139287.6 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 2240.1 | |
| All* | Total formula weight | 141527.7 |
