3DDG

GOLGI MANNOSIDASE II complex with (3R,4R,5R)-3,4-Dihydroxy-5-({[(1R)-2-hydroxy-1 phenylethyl]amino}methyl) methylpyrrolidin-2-one

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	alpha-mannosidase 2	polymer	1045	119701.6	1	UniProt (Q24451) Pfam (PF01074) Pfam (PF09261) Pfam (PF21260) Pfam (PF07748) Pfam (PF18230) In PDB	Drosophila melanogaster (fruit fly)	Alpha-mannosidase II; Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase; MAN II; Golgi alpha-mannosidase II; AMAN II
2	A	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	1	Chemie (NAG)
3	A	PHOSPHATE ION	non-polymer		95.0	1	Chemie (PO4)
4	A	ZINC ION	non-polymer		65.4	1	Chemie (ZN)
5	A	(4R)-2-METHYLPENTANE-2,4-DIOL	non-polymer		118.2	1	Chemie (MRD)
6	A	(3R,4R,5R)-3,4-dihydroxy-5-({[(1R)-2-hydroxy-1-phenylethyl]amino}methyl)-1-methylpyrrolidin-2-one	non-polymer		280.3	1	Chemie (GB7)
7		water	water		18.0	1078	Chemie (HOH)

Sequence modifications

A: 13 - 1045 (UniProt: Q24451)

PDB	External Database	Details
Arg 1	-	expression tag
Ser 2	-	expression tag
Ser 3	-	expression tag
His 4	-	expression tag
His 5	-	expression tag
His 6	-	expression tag
His 7	-	expression tag
His 8	-	expression tag
His 9	-	expression tag
Gly 10	-	expression tag
Glu 11	-	expression tag
Phe 12	-	expression tag
Lys 907	Glu 970	variant

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	119701.6
Non-Polymers*	Number of molecules	5
	Total formula weight	780.1
All*	Total formula weight	120481.7

*Water molecules are not included.