3DCO
Drosophila NOD (3DC4) and Bovine Tubulin (1JFF) Docked into the 11-Angstrom Cryo-EM Map of Nucleotide-Free NOD Complexed to the Microtubule
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | N | Kinesin-like protein Nod | polymer | 344 | 38305.6 | 1 | UniProt (P18105) Pfam (PF00225) In PDB | Drosophila melanogaster (Fruit fly) | |
2 | A | Bovine Alpha Tubulin | polymer | 451 | 50107.2 | 1 | Pfam (PF00091) Pfam (PF03953) UniProt (by SIFTS) (P81947) In PDB | Bos taurus | |
3 | B | Bovine Beta Tubulin | polymer | 445 | 49907.8 | 1 | Pfam (PF00091) Pfam (PF03953) UniProt (by SIFTS) (Q6B856) In PDB | Bos taurus | |
4 | N, A | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
5 | N | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
6 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
7 | B | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 1 | Chemie (GTP) | |||
8 | B | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 1 | Chemie (GDP) | |||
9 | B | TAXOL | non-polymer | 853.9 | 1 | Chemie (TA1) |
Sequence modifications
N: 1 - 318 (UniProt: P18105)
PDB | External Database | Details |
---|---|---|
Met -14 | - | expression tag |
Ala -13 | - | expression tag |
Ser -12 | - | expression tag |
Asp -11 | - | expression tag |
Tyr -10 | - | expression tag |
Lys -9 | - | expression tag |
Asp -8 | - | expression tag |
Asp -7 | - | expression tag |
Asp -6 | - | expression tag |
Asp -5 | - | expression tag |
Lys -4 | - | expression tag |
Arg -3 | - | expression tag |
Arg -2 | - | expression tag |
Arg -1 | - | expression tag |
Gly 0 | - | expression tag |
Ala 319 | - | expression tag |
Ala 320 | - | expression tag |
Ala 321 | - | expression tag |
Leu 322 | - | expression tag |
Glu 323 | - | expression tag |
His 324 | - | expression tag |
His 325 | - | expression tag |
His 326 | - | expression tag |
His 327 | - | expression tag |
His 328 | - | expression tag |
His 329 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 138320.6 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 2361.5 | |
All* | Total formula weight | 140682.1 |