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3D0P

Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Ribonuclease Hpolymer13415429.42UniProt (Q9KEI9)RNase H
2B, D
(B, D)
DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DCP*DG)-3')polymer123663.42
3E
(C)
SODIUM IONnon-polymer23.01Chemie (NA)
4F, G, H, I
(A, B, C, D)
waterwater18.0166Chemie (HOH)
Sequence modifications
A, C: 61 - 194 (UniProt: Q9KEI9)
PDBExternal DatabaseDetails
Asn 132Asp 132engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight38185.5
Non-Polymers*Number of molecules1
Total formula weight23.0
All*Total formula weight38208.5
*Water molecules are not included.

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PDB entries from 2025-07-23

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