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3D0G

Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus human strain complexed with human-civet chimeric receptor ACE2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Angiotensin-converting enzyme 2polymer59769076.52UniProt (Q56NL1)
UniProt (Q9BYF1)
Pfam (PF01401)
Paguma larvata (Masked palm civet)ACE-related carboxypeptidase,Angiotensin-converting enzyme homolog,ACEH,Metalloprotease MPROT15
2C, D
(E, F)
Spike glycoproteinpolymer17920419.92UniProt (P59594)
Pfam (PF09408)
Human SARS coronavirus (SARS-CoV)S glycoprotein,E2,Peplomer protein
3E, H, I, J, N
(A, B, F)
2-acetamido-2-deoxy-alpha-D-glucopyranosenon-polymer221.25Chemie (NDG)
4F, K
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
5G, L
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
6M
(E)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
7O, P
(B, F)
waterwater18.027Chemie (HOH)
Sequence modifications
A, B: 19 - 55 (UniProt: Q56NL1)
A, B: 56 - 615 (UniProt: Q9BYF1)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight178992.9
Non-Polymers*Number of molecules10
Total formula weight1529.0
All*Total formula weight180521.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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