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3CCC

Crystal Structure of Human DPP4 in complex with a benzimidazole derivative

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Dipeptidyl peptidase 4polymer74085775.94UniProt (P27487)
Pfam (PF00930)
Pfam (PF00326)
Homo sapiens (human)Dipeptidyl peptidase IV, DPP IV, T-cell activation antigen CD26, TP103, Adenosine deaminase complexing protein 2, ADABP
2E, F, G, H
(E, F, G, H)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
3I, J, K, L, N...
(A, B, C, D)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.212Chemie (NAG)
4M, Q, U, X
(A, B, C, D)
7-(aminomethyl)-6-(2-chlorophenyl)-1-methyl-1H-benzimidazole-5-carbonitrilenon-polymer296.84Chemie (7AC)
5AA, BA, Y, Z
(C, D, A, B)
waterwater18.0277Chemie (HOH)
Sequence modifications
A, B, C, D: 39 - 766 (UniProt: P27487)
PDBExternal DatabaseDetails
Ala 27-expression tag
Asp 28-expression tag
Pro 29-expression tag
Gly 30-expression tag
Gly 31-expression tag
Ser 32-expression tag
His 33-expression tag
His 34-expression tag
His 35-expression tag
His 36-expression tag
His 37-expression tag
His 38-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight343103.8
BranchedNumber of molecules4
Total formula weight1697.6
Non-Polymers*Number of molecules16
Total formula weight3841.5
All*Total formula weight348642.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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