3C5M
Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Oligogalacturonate lyase | polymer | 396 | 45687.4 | 3 | UniProt (Q87K10) Pfam (PF14583) | Vibrio parahaemolyticus RIMD 2210633 | |
| 2 | D, E, F (A, B, C) | MANGANESE (II) ION | non-polymer | 54.9 | 3 | Chemie (MN) | |||
| 3 | G, H, I (A, B, C) | water | water | 18.0 | 209 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 388 (UniProt: Q87K10)
| PDB | External Database | Details |
|---|---|---|
| Ile 31 | Val 31 | SEE REMARK 999 |
| Leu 389 | - | expression tag |
| Glu 390 | - | expression tag |
| His 391 | - | expression tag |
| His 392 | - | expression tag |
| His 393 | - | expression tag |
| His 394 | - | expression tag |
| His 395 | - | expression tag |
| His 396 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 137062.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 164.8 | |
| All* | Total formula weight | 137227.1 |
