3BVH
Crystal Structure of Recombinant gammaD364A Fibrinogen Fragment D with the Peptide Ligand Gly-Pro-Arg-Pro-Amide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, D) | Fibrinogen alpha chain | polymer | 62 | 7276.4 | 2 | UniProt (P02671) Pfam (PF08702) | Homo sapiens (human) | |
| 2 | B, E (B, E) | Fibrinogen beta chain | polymer | 298 | 34171.4 | 2 | UniProt (P02675) Pfam (PF08702) Pfam (PF00147) | Homo sapiens (human) | |
| 3 | C, F (C, F) | Fibrinogen gamma chain | polymer | 293 | 33293.9 | 2 | UniProt (P02679) Pfam (PF08702) Pfam (PF00147) | Homo sapiens (human) | |
| 4 | G, H, I, J (G, I, H, J) | 4-mer peptide GPRP | polymer | 4 | 426.5 | 4 | synthetic construct | ||
| 5 | K, L (K, L) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
| 6 | M, N, O, P (B, C, E, F) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 7 | Q, R, S, T, U... (A, B, C, D, E...) | water | water | 18.0 | 446 | Chemie (HOH) |
Sequence modifications
C, F: 102 - 394 (UniProt: P02679)
| PDB | External Database | Details |
|---|---|---|
| Ala 364 | Asp 390 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 151189.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1141.1 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 160.3 | |
| All* | Total formula weight | 152490.9 |
