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3BHX

X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a transition state analog of Asp-Glu

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Glutamate carboxypeptidase 2polymer70979859.01UniProt (Q04609)
Pfam (PF02225)
Pfam (PF04389)
Pfam (PF04253)
Homo sapiens (human)Glutamate carboxypeptidase II, Membrane glutamate carboxypeptidase, mGCP, N- acetylated-alpha-linked acidic dipeptidase I, NAALADase I, Pteroylpoly-gamma-glutamate carboxypeptidase, Folylpoly-gamma- glutamate carboxypeptidase, FGCP, Folate hydrolase 1, Prostate- specific membrane antigen, PSMA, PSM
2B, C, D
(B, C, D)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
3E
(E)
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G81315DD)
4F, G, H
(A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
5I, J
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
6K
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
7L
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
8M
(A)
(2S)-2-{[(S)-(2-carboxyethyl)(hydroxy)phosphoryl]methyl}pentanedioic acidnon-polymer282.21Chemie (BHX)
9N
(A)
waterwater18.0665Chemie (HOH)
Sequence modifications
A: 44 - 750 (UniProt: Q04609)
PDBExternal DatabaseDetails
Arg 42-expression tag
Ser 43-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight79859.0
BranchedNumber of molecules4
Total formula weight2021.9
Non-Polymers*Number of molecules8
Total formula weight1152.2
All*Total formula weight83033.1
*Water molecules are not included.

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PDB entries from 2024-11-06

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