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3BD5

Crystal structure of single domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
catalytic antibodypolymer11212460.02Mus musculus (house mouse)DNA-degrading antibody
2C, E
(A, B)
COBALT (II) IONnon-polymer58.92Chemie (CO)
3D
(A)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.21Chemie (BTB)
4F, G
(A, B)
waterwater18.0115Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight24920.0
Non-Polymers*Number of molecules3
Total formula weight327.1
All*Total formula weight25247.1
*Water molecules are not included.

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PDB entries from 2025-07-23

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