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3B2X

Crystal Structure of E. coli Aminopeptidase N in complex with Lysine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Aminopeptidase Npolymer891101441.21UniProt (P04825)
Pfam (PF17900)
Pfam (PF01433)
Pfam (PF11940)
Pfam (PF17432)
Escherichia coliAlpha-aminoacylpeptide hydrolase
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, D
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
4E
(A)
LYSINEnon-polymer147.21Chemie (LYS)
5F, G, H
(A)
MALONATE IONnon-polymer102.03Chemie (MLI)
6I, J, K, L, M...
(A)
GLYCEROLnon-polymer92.19Chemie (GOL)
7R
(A)
waterwater18.01216Chemie (HOH)
Sequence modifications
A: 1 - 870 (UniProt: P04825)
PDBExternal DatabaseDetails
Met -20-expression tag
Gly -19-expression tag
Ser -18-expression tag
Ser -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight101441.2
Non-Polymers*Number of molecules16
Total formula weight1393.6
All*Total formula weight102834.8
*Water molecules are not included.

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PDB entries from 2025-07-16

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