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3AYX

Membrane-bound respiratory [NiFe] hydrogenase from Hydrogenovibrio marinus in an H2-reduced condition

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Membrane-bound hydrogenase large subunitpolymer59666574.42UniProt (F2Z6J6)
Pfam (PF00374)
Hydrogenovibrio marinusMEMBRANE-BOUND RESPIRATORY NI-FE HYDROGENASE LARGE SUBUNIT
2B, D
(B, D)
Membrane-bound hydrogenase small subunitpolymer28331306.72UniProt (F2Z6J5)
Pfam (PF01058)
Pfam (PF14720)
Hydrogenovibrio marinusMEMBRANE-BOUND RESPIRATORY NI-FE HYDROGENASE SMALL SUBUNIT
3E, V
(A, C)
FE (II) IONnon-polymer55.82Chemie (FE2)
4F, W
(A, C)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
5G, X
(A, C)
CARBON MONOXIDEnon-polymer28.02Chemie (CMO)
6H, I, Y, Z
(A, C)
CYANIDE IONnon-polymer26.04Chemie (CYN)
7AA, BA, CA, DA, EA...
(C, A)
OXYGEN ATOMnon-polymer16.010Chemie (O)
8FA, GA, O, P
(C, A)
GLYCEROLnon-polymer92.14Chemie (GOL)
9Q, U
(A, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
10HA, R
(D, B)
FE4-S3 CLUSTERnon-polymer319.62Chemie (F4S)
11IA, S
(D, B)
FE3-S4 CLUSTERnon-polymer295.82Chemie (F3S)
12JA, T
(D, B)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
13KA, LA, MA, NA
(A, B, C, D)
waterwater18.01655Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight195762.1
Non-Polymers*Number of molecules32
Total formula weight2900.2
All*Total formula weight198662.3
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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