3ASP
Crystal structure of P domain from Norovirus Funabashi258 stain in the complex with A-antigen
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Capsid protein | polymer | 326 | 35259.6 | 2 | UniProt (Q8JW44) Pfam (PF08435) In PDB | Norwalk-like virus | |
| 2 | C, D | alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 2 | In PDB BIRD (PRD_900131) GlyTouCan (G66163TI) | |||
| 3 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | water | water | 18.0 | 407 | Chemie (HOH) |
Sequence modifications
A, B: 221 - 541 (UniProt: Q8JW44)
| PDB | External Database | Details |
|---|---|---|
| Gly 216 | - | expression tag |
| Pro 217 | - | expression tag |
| Leu 218 | - | expression tag |
| Gly 219 | - | expression tag |
| Ser 220 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 70519.3 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1465.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 46.0 | |
| All* | Total formula weight | 72030.6 |
