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3ADB

Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
L-seryl-tRNA(Sec) kinasepolymer25931196.62UniProt (Q58933)
Pfam (PF08433)
Methanocaldococcus jannaschii (Methanococcus jannaschii)O-phosphoseryl-tRNA(Sec) kinase, PSTK
2C, D
(C, D)
selenocysteine tRNApolymer9229714.72Methanopyrus kandleri
3E
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
4F
(B)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.21Chemie (ANP)
5G
(B)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
6H, I, J, K
(A, B, C, D)
waterwater18.0159Chemie (HOH)
Sequence modifications
A, B: 1 - 248 (UniProt: Q58933)
PDBExternal DatabaseDetails
Mse -10-expression tag
Asn -9-expression tag
His -8-expression tag
Lys -7-expression tag
Val -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight121822.6
Non-Polymers*Number of molecules3
Total formula weight625.5
All*Total formula weight122448.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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