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3ABL

Bovine heart cytochrome c oxidase at the fully oxidized state (15-s X-ray exposure dataset)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, N
(A, N)
Cytochrome c oxidase subunit 1polymer51457093.92UniProt (P00396)
Pfam (PF00115)
Bos taurus (bovine)Cytochrome c oxidase polypeptide I
2B, O
(B, O)
Cytochrome c oxidase subunit 2polymer22726068.42UniProt (P68530)
Pfam (PF02790)
Pfam (PF00116)
Bos taurus (bovine)Cytochrome c oxidase polypeptide II
3C, P
(C, P)
Cytochrome c oxidase subunit 3polymer26129957.62UniProt (P00415)
Pfam (PF00510)
Bos taurus (bovine)Cytochrome c oxidase polypeptide III
4D, Q
(D, Q)
Cytochrome c oxidase subunit 4 isoform 1polymer14717179.62UniProt (P00423)
Pfam (PF02936)
Bos taurus (bovine)Cytochrome c oxidase subunit IV isoform 1, COX IV-1, Cytochrome c oxidase polypeptide IV
5E, R
(E, R)
Cytochrome c oxidase subunit 5Apolymer10912453.12UniProt (P00426)
Pfam (PF02284)
Bos taurus (bovine)Cytochrome c oxidase polypeptide Va
6F, S
(F, S)
Cytochrome c oxidase subunit 5Bpolymer9810684.02UniProt (P00428)
Pfam (PF01215)
Bos taurus (bovine)Cytochrome c oxidase polypeptide Vb, Cytochrome c oxidase polypeptide VIa
7G, T
(G, T)
Cytochrome c oxidase subunit 6A2polymer859629.82UniProt (P07471)
Pfam (PF02046)
Bos taurus (bovine)Cytochrome c oxidase polypeptide VIa-heart, COXVIAH, Cytochrome c oxidase polypeptide VIb
8H, U
(H, U)
Cytochrome c oxidase subunit 6B1polymer8510039.22UniProt (P00429)
Pfam (PF02297)
Bos taurus (bovine)Cytochrome c oxidase subunit VIb isoform 1, COX VIb-1, Cytochrome c oxidase polypeptide VII, Cytochrome c oxidase subunit AED
9I, V
(I, V)
Cytochrome c oxidase subunit 6Cpolymer738537.02UniProt (P04038)
Pfam (PF02937)
Bos taurus (bovine)Cytochrome c oxidase polypeptide VIc, Cytochrome c oxidase subunit STA
10J, W
(J, W)
Cytochrome c oxidase polypeptide 7A1polymer596682.72UniProt (P07470)
Pfam (PF02238)
Bos taurus (bovine)Cytochrome c oxidase polypeptide VIIa-heart, Cytochrome c oxidase subunit VIIa-H, COX VIIa-M, VIIIC
11K, X
(K, X)
Cytochrome c oxidase subunit 7Bpolymer566365.22UniProt (P13183)
Pfam (PF05392)
Bos taurus (bovine)Cytochrome c oxidase polypeptide VIIb, IHQ
12L, Y
(L, Y)
Cytochrome c oxidase subunit 7Cpolymer475449.42UniProt (P00430)
Pfam (PF02935)
Bos taurus (bovine)Cytochrome c oxidase polypeptide VIIc, Cytochrome c oxidase polypeptide VIIIA
13M, Z
(M, Z)
Cytochrome c oxidase subunit 8Bpolymer464967.82UniProt (P10175)
Pfam (PF02285)
Bos taurus (bovine)Cytochrome c oxidase subunit 8H, Cytochrome c oxidase polypeptide VIII-heart, Cytochrome c oxidase subunit 8-1, VIIIb, IX
14AA, CB
(A, N)
COPPER (II) IONnon-polymer63.52Chemie (CU)
15BA, DB
(A, N)
PEROXIDE IONnon-polymer32.02Chemie (PER)
16CA, EB
(A, N)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
17DA, FB
(A, N)
SODIUM IONnon-polymer23.02Chemie (NA)
18EA, FA, GB, HB
(A, N)
HEME-Anon-polymer852.84Chemie (HEA)
19AB, GA, IB, JB, TA...
(L, A, N, D, Q)
TRISTEAROYLGLYCEROLnon-polymer891.56Chemie (TGL)
20HA, IA, KB, LB, PA...
(A, N, C, P)
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEnon-polymer749.08Chemie (PGV)
21JA, MB
(B, O)
DINUCLEAR COPPER IONnon-polymer127.12Chemie (CUA)
22KA, OB
(B, O)
(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDEnon-polymer759.12Chemie (PSC)
23CC, LA, NB, OA, RB...
(W, B, O, C, P...)
CHOLIC ACIDnon-polymer408.68Chemie (CHD)
24BB, DC, MA, PB
(M, Z, C, P)
DECYL-BETA-D-MALTOPYRANOSIDEnon-polymer482.64Chemie (DMU)
25NA, QB
(C, P)
UNKNOWN ATOM OR IONnon-polymer2Chemie (UNX)
26BC, RA, WB, XA
(T, C, P, G)
CARDIOLIPINnon-polymer1464.04Chemie (CDL)
27UA, ZB
(F, S)
ZINC IONnon-polymer65.42Chemie (ZN)
28AC, SB, TB, VA, WA...
(T, P, G)
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATEnon-polymer768.16Chemie (PEK)
29AD, BD, CD, DD, EC...
(W, X, Y, Z, A...)
waterwater18.01708Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains26
Total formula weight410215.6
Non-Polymers*Number of molecules56
Total formula weight32604.4
All*Total formula weight442820.0
*Water molecules are not included.

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PDB entries from 2024-10-30

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