34QD
The structure of the monoclinic crystal form of the type II ribosome inactivating protein from Winter Aconite Eranthis hyemalis.
Replaces: 9TPEEntity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | N-glycosidase | polymer | 241 | 26802.3 | 1 | UniProt (A0ACN4YGJ0) | Eranthis hyemalis | |
| 2 | B (B) | Lectin | polymer | 261 | 28875.0 | 1 | UniProt (A0ACN4YGJ1) | Eranthis hyemalis | |
| 3 | C (C) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G18638YB) | |||
| 4 | D (D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 5 | E, I, J (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) PubChem (888) | |||
| 6 | F, G, H (B) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 3 | Chemie (PG4) PubChem (8200) | |||
| 7 | K (B) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 8 | L, M (A, B) | water | water | 18.0 | 807 | Chemie (HOH) |
Sequence modifications
A: 1 - 241 (UniProt: A0ACN4YGJ0)
B: 1 - 261 (UniProt: A0ACN4YGJ1)
| PDB | External Database | Details |
|---|---|---|
| Glu 49 | Asn 49 | conflict |
| Thr 100 | Ser 100 | conflict |
| Glu 130 | Asp 130 | conflict |
| Lys 180 | Arg 180 | conflict |
| Gln 185 | Glu 185 | conflict |
| Glu 194 | Gln 194 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Asn 16 | Asp 16 | conflict |
| Asp 92 | Asn 92 | conflict |
| Asn 156 | Asp 156 | conflict |
| Gln 165 | Glu 165 | conflict |
| Ala 194 | Ser 194 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55677.3 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1157.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 691.0 | |
| All* | Total formula weight | 57525.5 |






