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2ZDV

Exploring Thrombin S1 pocket

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L)
Thrombin Light Chainpolymer364096.51UniProt (P00734)
Pfam (PF09396)
Homo sapiens (human)Coagulation factor II
2B
(H)
Thrombin Heavy Chainpolymer25929780.21UniProt (P00734)
Pfam (PF00089)
Homo sapiens (human)Coagulation factor II
3C
(I)
Hirudin variant-1polymer111420.51UniProt (P01050)Hirudo medicinalislepirudin
4D, E
(H)
SODIUM IONnon-polymer23.02Chemie (NA)
5F
(H)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
6G
(H)
D-phenylalanyl-N-(3-fluorobenzyl)-L-prolinamidenon-polymer369.41BIRD (PRD_000602)
Chemie (37U)
7H, I, J
(L, H, I)
waterwater18.0215Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight35297.2
Non-Polymers*Number of molecules4
Total formula weight510.4
All*Total formula weight35807.6
*Water molecules are not included.

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PDB entries from 2024-12-25

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