2YP1
Crystallization of a 45 kDa peroxygenase- peroxidase from the mushroom Agrocybe aegerita and structure determination by SAD utilizing only the haem iron
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | AROMATIC PEROXYGENASE | polymer | 325 | 35692.7 | 4 | UniProt (B9W4V6) Pfam (PF01328) | AGROCYBE AEGERITA | AAP |
| 2 | E (E) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G56014GC) | |||
| 3 | F, J (F, J) | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 2 | In PDB GlyTouCan (G94626GC) | |||
| 4 | G, I, K, L, N... (G, I, K, L, N...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 9 | In PDB GlyTouCan (G42666HT) | |||
| 5 | H, M (H, M) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 2 | In PDB GlyTouCan (G80966KZ) | |||
| 6 | O, T (O, T) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 7 | BA, HA, QA, U (B, C, D, A) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 4 | Chemie (HEM) | |||
| 8 | CA, IA, RA, V (B, C, D, A) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 9 | DA, KA, PA, VA, W (B, C, D, A) | ACETATE ION | non-polymer | 59.0 | 5 | Chemie (ACT) | |||
| 10 | AA, EA, FA, GA, LA... (A, B, C, D) | SULFATE ION | non-polymer | 96.1 | 13 | Chemie (SO4) | |||
| 11 | JA, SA, TA, UA (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 12 | AB, BB, YA, ZA (C, D, A, B) | water | water | 18.0 | 1185 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 142770.8 | |
| Branched | Number of molecules | 16 |
| Total formula weight | 10681.8 | |
| Non-Polymers* | Number of molecules | 30 |
| Total formula weight | 4992.0 | |
| All* | Total formula weight | 158444.7 |






