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2YOR

Crystallization of a 45 kDa peroxygenase- peroxidase from the mushroom Agrocybe aegerita and structure determination by SAD utilizing only the haem iron

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BAROMATIC PEROXYGENASEpolymer32535692.72UniProt (B9W4V6)
Pfam (PF01328)
In PDB
AGROCYBE AEGERITA (BLACK POPLAR MUSHROOM)AAPIIPH85, AAP
2C, Ebeta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.52In PDB
GlyTouCan (G15407YE)
3Dalpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.81In PDB
GlyTouCan (G22768VO)
4Falpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1397.21In PDB
GlyTouCan (G61846BY)
5G, H, I, J2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
6A, BPROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
7A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
8A, B1H-imidazol-5-ylmethanolnon-polymer98.12Chemie (MZ0)
9B, A2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.25Chemie (NAG)
10A, Bbeta-D-mannopyranosenon-polymer180.22Chemie (BMA)
11B, ASULFATE IONnon-polymer96.16Chemie (SO4)
12B, ACHLORIDE IONnon-polymer35.54Chemie (CL)
13B2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
14waterwater18.0643Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight71385.4
BranchedNumber of molecules8
Total formula weight5178.8
Non-Polymers*Number of molecules24
Total formula weight3784.5
All*Total formula weight80348.6
*Water molecules are not included.

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PDB entries from 2024-09-04

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